PSMB1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSMB1 protein abundance is significantly associated with the RNA expression of many other genes, with 14,735 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PSMB1-associated genes across cancer lineages are PSME2, PSMB9, and TPTEP1. Each is linked with PSMB1 in more than 5 cancer types. Because this analysis shows association rather than direction, both PSMB1-to-partner and partner-to-PSMB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PSMB1 versus PSME2 in UCEC, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSMB1→partner) and Y-score (partner→PSMB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPSME2 →+0.968+0.170<.001.00136
BRCAPSMB9 →+1.074+0.260.001<.00136
LUADTPTEP1 →-1.088-0.154.002<.00134
BRCAETV7 →+0.892+0.158<.001<.00134
LUADPSMA6 →+0.353+0.093.002.00134
BRCAIL21R →+0.633+0.221.005.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,735 associations by consensus.

PSMB1 vs PSME2 — UCEC

Per-sample scatter of PSMB1 vs PSME2 in UCEC (Pearson r = 0.34).

Explore this scatter interactively →

Exploration