PRRX1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRRX1 mutation is significantly associated with the total protein of many other genes, with 32 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRRX1-associated genes across cancer lineages are p27_pT198, PCNA, and Shc_pY317. Each is linked with PRRX1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRRX1-to-partner and partner-to-PRRX1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p27_pT198 grouped by PRRX1-low versus PRRX1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRRX1→partner) and Y-score (partner→PRRX1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp27_pT198 →+0.089+3.321.033.01032
UCECPCNA →+0.259+3.169.002.01832
UCECShc_pY317 →-0.226-3.459<.001.00532
UCECSTAT3_pY705 →-0.384-1.584<.001.03632
UCECc-Kit →-0.194-2.000.034.01032
UCEC4E-BP1 →+0.397+3.459<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 32 associations by consensus.

p27_pT198 by PRRX1 expression — UCEC

Box plot of p27_pT198 in PRRX1-low vs PRRX1-high samples in UCEC.

Explore this box plot interactively →

Exploration