PRRG1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRRG1 mutation is significantly associated with the total protein of many other genes, with 26 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRRG1-associated genes across cancer lineages are GAPDH, MEK1, and 14-3-3_beta. Each is linked with PRRG1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRRG1-to-partner and partner-to-PRRG1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GAPDH grouped by PRRG1-low versus PRRG1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRRG1→partner) and Y-score (partner→PRRG1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGAPDH →+0.424+2.115.044.01732
UCECMEK1 →+0.435+2.502.002.00232
UCEC14-3-3_beta →-0.106-3.432.007.00531
UCECeEF2 →+0.450+3.321.001.00931
UCECERK2 →+0.225+2.000.002.01031
UCECGATA6 →-0.150-2.985.013.03431
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

GAPDH by PRRG1 expression — UCEC

Box plot of GAPDH in PRRG1-low vs PRRG1-high samples in UCEC.

Explore this box plot interactively →

Exploration