PRR4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRR4 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,364 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PRR4-associated proteins across cancer lineages are GTF2I, HNRNPUL1, and PRPF31. Each is linked with PRR4 in more than 3 cancer types. Because this analysis shows association rather than direction, both PRR4-to-partner and partner-to-PRR4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRR4 versus GTF2I in GBM, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PRR4→partner) and Y-score (partner→PRR4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMGTF2I →+0.331+0.528<.001<.00134
GBMHNRNPUL1 →+0.258+0.459<.001<.00134
GBMPRPF31 →+0.320+0.574<.001<.00133
GBMUNK →+0.217+0.504<.001<.00133
GBMITGA3 →-0.516-0.442<.001<.00133
GBMRPL7 →-0.345-0.407.002.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,364 associations by consensus.

PRR4 vs GTF2I — GBM

Per-sample scatter of PRR4 vs GTF2I in GBM (Pearson r = 0.54).

Explore this scatter interactively →

Exploration