PRPH2

Across TCGA cell cohorts, PRPH2 RNA expression is significantly associated with the RNA expression of many other genes, with 3,230 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PRPH2-associated genes across cancer lineages are TSKS, MFSD4B, and ZMYM6. Each is linked with PRPH2 in more than 4 cancer types. Because this analysis shows association rather than direction, both PRPH2-to-partner and partner-to-PRPH2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRPH2 versus TSKS in UPPER_AERODIGESTIVE_TRACT, with a Pearson correlation of 0.69.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRPH2→partner) and Y-score (partner→PRPH2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	TSKS →	+1.106	+0.065	<.001	<.001	3	3
LIVER	MFSD4B →	+0.586	+0.158	<.001	.002	3	3
BREAST	ZMYM6 →	+0.722	+0.073	<.001	<.001	3	3
LUNG_NSCLC_LUSC	ZNF431 →	+1.532	+0.057	.001	.005	1	5
UPPER_AERODIGESTIVE_TRACT	IGFALS →	+0.214	+0.050	<.001	<.001	3	3
BREAST	TVP23A →	+0.218	+0.079	<.001	<.001	2	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,230 associations by consensus.

PRPH2 vs TSKS — UPPER_AERODIGESTIVE_TRACT

Explore this scatter interactively →