PRMT7

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRMT7 mutation is significantly associated with the RNA expression of many other genes, with 1,378 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRMT7-associated genes across cancer lineages are AP1B1, TXN2, and TANGO6. Each is linked with PRMT7 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRMT7-to-partner and partner-to-PRMT7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AP1B1 grouped by PRMT7-low versus PRMT7-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRMT7→partner) and Y-score (partner→PRMT7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAP1B1 →+0.347+2.353.006.00332
UCECTXN2 →+0.314+2.939.001<.00132
UCECTANGO6 →+0.493+2.330<.001.00332
UCECTTC23 →+0.287+2.711.008.00332
UCECGNPDA1 →+0.425+2.186<.001.00132
UCECTNFSF9 →+0.798+2.643.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,378 associations by consensus.

AP1B1 by PRMT7 expression — UCEC

Box plot of AP1B1 in PRMT7-low vs PRMT7-high samples in UCEC.

Explore this box plot interactively →

Exploration