PRMT1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PRMT1 mutation is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PRMT1-associated genes across cancer lineages are GML, CFC1, and NKX2-6. Each is linked with PRMT1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRMT1-to-partner and partner-to-PRMT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GML grouped by PRMT1-low versus PRMT1-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRMT1→partner) and Y-score (partner→PRMT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaGML →+0.080+4.152<.001.00931
BLOOD_LeukemiaCFC1 →+0.014+4.539<.001.00731
BLOOD_LeukemiaNKX2-6 →+0.489+5.786<.001<.00131
BLOOD_LeukemiaOR1G1 →+0.083+4.705<.001.00331
BLOOD_LeukemiaCCT8L2 →+0.011+4.874<.001.00231
BLOOD_LeukemiaKRTAP12-3 →+0.092+4.539<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

GML by PRMT1 expression — BLOOD_Leukemia

Box plot of GML in PRMT1-low vs PRMT1-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration