PRLR

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PRLR mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible PRLR-associated genes across cancer lineages are MRGPRX1, PRAMEF10, and MAGEB5. Each is linked with PRLR in more than 1 cancer types. Because this analysis shows association rather than direction, both PRLR-to-partner and partner-to-PRLR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MRGPRX1 grouped by PRLR-low versus PRLR-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRLR→partner) and Y-score (partner→PRLR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCMRGPRX1 →+0.129+4.058<.001.00731
LUNG_SCLCPRAMEF10 →+0.708+4.058<.001.00731
LUNG_SCLCMAGEB5 →+0.012+4.058<.001.00731
LUNG_SCLCSULT1C3 →+0.161+3.523.003.00831
LUNG_SCLCPRAMEF17 →+0.008+4.058<.001.00731
LUNG_SCLCPRAMEF25 →+0.134+3.523.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

MRGPRX1 by PRLR expression — LUNG_SCLC

Box plot of MRGPRX1 in PRLR-low vs PRLR-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration