PRKD2

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PRKD2 mass-spec protein differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of PRKD2’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where PRKD2 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types PRKD2 is over-expressed in tumor, although a few such as COAD and LUAD show the opposite, repressed pattern.

CCRCC, HNSC, and LSCC are the cancer types where PRKD2 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PRKD2 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCMaleIII,IV+0.471<.00112view →
HNSCAllAll+0.157<.0018view →
LSCCFemaleAll+0.234<.0016view →
COADAllII,III,IV−0.136.0016view →
LUADFemaleAll−0.105.0141view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

PRKD2–CCRCC

Tumor-vs-normal mass-spec protein box plot for PRKD2 in CCRCC.

Open the CCRCC breakdown →

Exploration