PRKD2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PRKD2 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,788 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PRKD2-associated GO terms across cancer lineages are Negative regulation of calcium ion export across plasma membrane, Morphogenesis of an endothelium, and Endothelial tube morphogenesis. Each is linked with PRKD2 in more than 12 cancer types. Because this analysis shows association rather than direction, both PRKD2-to-partner and partner-to-PRKD2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of calcium ion export across plasma membrane grouped by PRKD2-low versus PRKD2-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PRKD2→partner) and Y-score (partner→PRKD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONENegative regulation of calcium ion export across plasma membrane →+0.097+0.931<.001<.001312
URINARY_TRACTMorphogenesis of an endothelium →+0.177+0.607<.001.007213
URINARY_TRACTEndothelial tube morphogenesis →+0.177+0.607<.001.007213
UPPER_AERODIGESTIVE_TRACTRegulation of pattern recognition receptor signaling pathway →+0.075+0.591<.001<.001311
BLOOD_MyelomaRegulation of calcium ion export across plasma membrane →+0.132+1.496.002.003311
BREASTRegulation of protein localization to nucleus →+0.076+0.774<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,788 associations by consensus.

Negative regulation of calcium ion export across plasma membrane by PRKD2 expression — BONE

Box plot of Negative regulation of calcium ion export across plasma membrane in PRKD2-low vs PRKD2-high samples in BONE.

Explore this box plot interactively →

Exploration