PRKCI

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRKCI protein abundance is significantly associated with the RNA expression of many other genes, with 12,654 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PRKCI-associated genes across cancer lineages are DNAJC19, MRPL3, and MYNN. Each is linked with PRKCI in more than 6 cancer types. Because this analysis shows association rather than direction, both PRKCI-to-partner and partner-to-PRKCI results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRKCI versus DNAJC19 in LSCC, with a Pearson correlation of 0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRKCI→partner) and Y-score (partner→PRKCI) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDNAJC19 →+0.745+0.470<.001<.00137
HNSCMRPL3 →+0.779+0.233.007.00736
LSCCMYNN →+0.920+0.518<.001<.00136
LSCCYEATS2 →+0.691+0.458<.001<.00136
HNSCAGAP2 →-0.657-0.234<.001.00435
LSCCMRPL47 →+0.779+0.345<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,654 associations by consensus.

PRKCI vs DNAJC19 — LSCC

Per-sample scatter of PRKCI vs DNAJC19 in LSCC (Pearson r = 0.56).

Explore this scatter interactively →

Exploration