PRKCI

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRKCI mutation is significantly associated with the total protein of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRKCI-associated genes across cancer lineages are p38-MAPK_pT180_Y182, TFRC, and ATM. Each is linked with PRKCI in more than 1 cancer types. Because this analysis shows association rather than direction, both PRKCI-to-partner and partner-to-PRKCI results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p38-MAPK_pT180_Y182 grouped by PRKCI-low versus PRKCI-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRKCI→partner) and Y-score (partner→PRKCI) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp38-MAPK_pT180_Y182 →-0.425-2.222.010.01032
UCECTFRC →+0.475+1.502.014.03032
UCECATM →-0.502-1.847.002.00832
UCECc-Kit →-0.207-3.156.015.01832
UCECCyclin-B1 →+0.633+2.736.002<.00132
UCECEGFR_pY1068 →-0.254-3.700.005.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

p38-MAPK_pT180_Y182 by PRKCI expression — UCEC

Box plot of p38-MAPK_pT180_Y182 in PRKCI-low vs PRKCI-high samples in UCEC.

Explore this box plot interactively →

Exploration