PRKCH

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRKCH mutation is significantly associated with the total protein of many other genes, with 36 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRKCH-associated genes across cancer lineages are p38-MAPK_pT180_Y182, S6_pS240_S244, and 4E-BP1. Each is linked with PRKCH in more than 1 cancer types. Because this analysis shows association rather than direction, both PRKCH-to-partner and partner-to-PRKCH results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p38-MAPK_pT180_Y182 grouped by PRKCH-low versus PRKCH-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRKCH→partner) and Y-score (partner→PRKCH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp38-MAPK_pT180_Y182 →-0.381-1.649.016.01132
UCECS6_pS240_S244 →+0.332+1.362.020.03732
UCEC4E-BP1 →+0.204+2.029.033.01732
UCECCyclin-E2 →+0.152+1.710.010.02532
UCECDvl3 →+0.140+1.662.030.01132
UCECeIF4E →+0.158+2.000.034.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

p38-MAPK_pT180_Y182 by PRKCH expression — UCEC

Box plot of p38-MAPK_pT180_Y182 in PRKCH-low vs PRKCH-high samples in UCEC.

Explore this box plot interactively →

Exploration