PRELID3B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRELID3B protein abundance is significantly associated with the RNA expression of many other genes, with 2,313 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible PRELID3B-associated genes across cancer lineages are ZNF701, GALNT7, and LINC00475. Each is linked with PRELID3B in more than 1 cancer types. Because this analysis shows association rather than direction, both PRELID3B-to-partner and partner-to-PRELID3B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRELID3B versus ZNF701 in HNSC, with a Pearson correlation of -0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRELID3B→partner) and Y-score (partner→PRELID3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCZNF701 →-0.723-0.531<.001<.00132
BRCAGALNT7 →-1.354-0.518.004<.00132
LSCCLINC00475 →-0.431-0.438.004<.00132
LUADADAMTS9-AS2 →-0.783-0.387.003<.00132
HNSCMYOM2 →-1.062-0.401.002.00932
HNSCZNF14 →-0.660-0.668.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,313 associations by consensus.

PRELID3B vs ZNF701 — HNSC

Per-sample scatter of PRELID3B vs ZNF701 in HNSC (Pearson r = -0.41).

Explore this scatter interactively →

Exploration