PRDX4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRDX4 mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRDX4-associated genes across cancer lineages are Caspase-7-cleavedD198, Fibronectin, and GSK3-a-b. Each is linked with PRDX4 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRDX4-to-partner and partner-to-PRDX4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by PRDX4-low versus PRDX4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRDX4→partner) and Y-score (partner→PRDX4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.585+3.019.034.01932
UCECFibronectin →-0.310-3.700.044.00131
UCECGSK3-a-b →-0.159-2.584.011.01131
UCECp90 RSK_pT359_S363 →+0.229+3.009.015.01931
UCECSLC1A5 →-0.469-2.314.028.03531
UCECTuberin_pT1462 →+0.273+2.331.011.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

Caspase-7-cleavedD198 by PRDX4 expression — UCEC

Box plot of Caspase-7-cleavedD198 in PRDX4-low vs PRDX4-high samples in UCEC.

Explore this box plot interactively →

Exploration