PRDM5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRDM5 mutation is significantly associated with the total protein of many other genes, with 40 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRDM5-associated genes across cancer lineages are eEF2, eIF4E, and FOXO3a_pS318_S321. Each is linked with PRDM5 in more than 2 cancer types. Because this analysis shows association rather than direction, both PRDM5-to-partner and partner-to-PRDM5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by PRDM5-low versus PRDM5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRDM5→partner) and Y-score (partner→PRDM5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.257+2.115.015.01632
COADeIF4E →+0.219+2.820.017.03532
UCECFOXO3a_pS318_S321 →-0.114-1.864.002.00232
UCECJNK_pT183_Y185 →-0.124-1.584.013.01732
UCECNF-kB-p65_pS536 →-0.267-1.700.049.04032
UCECPDCD4 →-0.467-1.584<.001.01532
Each partner links to its Q-omics profile. Showing the 6 strongest of 40 associations by consensus.

eEF2 by PRDM5 expression — UCEC

Box plot of eEF2 in PRDM5-low vs PRDM5-high samples in UCEC.

Explore this box plot interactively →

Exploration