PRDM4

Across TCGA patient cohorts, PRDM4 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,018 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PRDM4-associated proteins across cancer lineages are MYEF2, SRSF9, and MEPCE. Each is linked with PRDM4 in more than 5 cancer types. Because this analysis shows association rather than direction, both PRDM4-to-partner and partner-to-PRDM4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRDM4 versus MYEF2 in LSCC, with a Pearson correlation of 0.44.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PRDM4→partner) and Y-score (partner→PRDM4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MYEF2 →	+0.723	+0.352	<.001	<.001	3	6
LSCC	SRSF9 →	+0.305	+0.368	<.001	<.001	3	5
GBM	MEPCE →	+0.309	+0.220	<.001	<.001	3	4
LSCC	MYG1 →	+0.283	+0.474	<.001	<.001	3	4
LSCC	NUP188 →	+0.179	+0.406	<.001	<.001	3	4
GBM	TRRAP →	+0.225	+0.244	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,018 associations by consensus.

PRDM4 vs MYEF2 — LSCC

Explore this scatter interactively →