Across TCGA cell cohorts, PRAMEF9 RNA expression is significantly associated with the RNA expression of many other genes, with 987 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible PRAMEF9-associated genes across cancer lineages are PRAMEF15, PRAMEF7, and PRAMEF12. Each is linked with PRAMEF9 in more than 9 cancer types. Because this analysis shows association rather than direction, both PRAMEF9-to-partner and partner-to-PRAMEF9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRAMEF9→partner) and Y-score (partner→PRAMEF9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	PRAMEF15 →	+0.315	+0.395	<.001	<.001	3	10
BREAST	PRAMEF7 →	+0.181	+0.069	<.001	.004	3	9
BREAST	PRAMEF12 →	+0.503	+0.049	<.001	.008	3	9
BREAST	TRIM49B →	+0.949	+0.067	<.001	.001	3	9
UPPER_AERODIGESTIVE_TRACT	PRAMEF4 →	+0.280	+0.395	<.001	<.001	3	8
BREAST	PRAMEF14 →	+0.329	+0.076	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 987 associations by consensus.

Exploration

PRAMEF9 survival (RNA) · tumor vs normal (RNA) · all PRAMEF9 data types