Across TCGA cell cohorts, PRAMEF9 RNA expression is significantly associated with the mutation status of many other genes, with 222 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible PRAMEF9-associated genes across cancer lineages are CNOT6L, CEP250, and TANC1. Each is linked with PRAMEF9 in more than 2 cancer types. Because this analysis shows association rather than direction, both PRAMEF9-to-partner and partner-to-PRAMEF9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRAMEF9→partner) and Y-score (partner→PRAMEF9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	CNOT6L →	+5.357	+0.263	.003	<.001	3	3
LUNG_NSCLC_LUAD	CEP250 →	+3.228	+0.005	.003	.002	3	3
URINARY_TRACT	TANC1 →	+4.087	+0.010	.009	<.001	3	2
URINARY_TRACT	TRPM6 →	+4.087	+0.010	.009	<.001	3	2
URINARY_TRACT	SBNO1 →	+5.087	+0.013	.004	<.001	3	2
PANCREAS	ABCC11 →	+4.614	+0.005	.004	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 222 associations by consensus.

Exploration

PRAMEF9 survival (RNA) · tumor vs normal (RNA) · all PRAMEF9 data types