PRAMEF25

Across TCGA patient cohorts, PRAMEF25 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,536 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PRAMEF25-associated GO terms across cancer lineages are Skeletal system morphogenesis, Regulation of mitochondrial gene expression, and DNA conformation change. Each is linked with PRAMEF25 in more than 3 cancer types. Because this analysis shows association rather than direction, both PRAMEF25-to-partner and partner-to-PRAMEF25 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Skeletal system morphogenesis grouped by PRAMEF25-low versus PRAMEF25-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PRAMEF25→partner) and Y-score (partner→PRAMEF25) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Skeletal system morphogenesis →	+0.077	+0.018	<.001	<.001	3	3
STAD	Regulation of mitochondrial gene expression →	+0.118	+0.018	<.001	<.001	3	3
STAD	DNA conformation change →	+0.121	+0.015	<.001	<.001	3	3
STAD	Cellular response to muramyl dipeptide →	+0.075	+0.018	<.001	<.001	3	3
STAD	Regeneration →	+0.090	+0.021	<.001	<.001	3	3
STAD	Response to estradiol →	+0.102	+0.018	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,536 associations by consensus.

Skeletal system morphogenesis by PRAMEF25 expression — STAD

Explore this box plot interactively →