PRAMEF19

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRAMEF19 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,523 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PRAMEF19-associated GO terms across cancer lineages are Branching morphogenesis of an epithelial tube, Regulation of axonogenesis, and Epithelial tube formation. Each is linked with PRAMEF19 in more than 8 cancer types. Because this analysis shows association rather than direction, both PRAMEF19-to-partner and partner-to-PRAMEF19 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PRAMEF19→partner) and Y-score (partner→PRAMEF19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADBranching morphogenesis of an epithelial tube →+0.065+0.155<.001<.00139
STADRegulation of axonogenesis →+0.053+0.154<.001<.00139
STADEpithelial tube formation →+0.069+0.167<.001<.00139
STADFat cell differentiation →+0.062+0.154<.001<.00139
STADPositive regulation of transcription by RNA polymerase I →+0.092+0.165<.001<.00139
STADRegulation of embryonic development →+0.073+0.156<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,523 associations by consensus.

Exploration