PPY

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPY protein abundance is significantly associated with the RNA expression of many other genes, with 700 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible PPY-associated genes across cancer lineages are SLC8A3, MYLK2, and CDH20. Each is linked with PPY in more than 1 cancer types. Because this analysis shows association rather than direction, both PPY-to-partner and partner-to-PPY results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PPY versus SLC8A3 in PDAC, with a Pearson correlation of 0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPY→partner) and Y-score (partner→PPY) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSLC8A3 →+0.314+1.458<.001<.00131
PDACMYLK2 →+0.568+0.900.003<.00131
PDACCDH20 →+0.169+0.859.009.00631
PDACPCSK1N →+0.828+1.109.009.00131
PDACDHRS12 →+0.221+0.878.001.00531
PDACNOMO3 →+0.399+1.005.004.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 700 associations by consensus.

PPY vs SLC8A3 — PDAC

Per-sample scatter of PPY vs SLC8A3 in PDAC (Pearson r = 0.44).

Explore this scatter interactively →

Exploration