PPT2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPT2 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,715 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PPT2-associated proteins across cancer lineages are GNL1, NELFB, and COPG1. Each is linked with PPT2 in more than 5 cancer types. Because this analysis shows association rather than direction, both PPT2-to-partner and partner-to-PPT2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PPT2→partner) and Y-score (partner→PPT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVGNL1 →+0.391+0.721<.001<.00136
GBMNELFB →+0.271+0.316<.001<.00136
LSCCCOPG1 →-0.224-0.494<.001<.00135
GBMGTF3C4 →+0.292+0.382.001<.00135
LSCCXPO5 →+0.562+0.555<.001<.00135
GBMARPC2 →-0.227-0.316<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,715 associations by consensus.

Exploration