PPP3CA

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PPP3CA mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of PPP3CA’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where PPP3CA mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types PPP3CA is over-expressed in tumor, although a few such as LSCC and COAD show the opposite, repressed pattern.

CCRCC, LSCC, and COAD are the cancer types where PPP3CA tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PPP3CA mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCAllAll+0.169<.00110view →
LSCCMaleAll−0.257<.0018view →
COADFemaleII,III,IV−0.148<.0018view →
LUADAllII,III,IV−0.116.0016view →
HNSCMaleAll−0.114.0036view →
PDACAllAll+0.170.0024view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

PPP3CA–CCRCC

Tumor-vs-normal mass-spec protein box plot for PPP3CA in CCRCC.

Open the CCRCC breakdown →

Exploration