PPP2R5D

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPP2R5D protein abundance is significantly associated with the RNA expression of many other genes, with 13,043 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PPP2R5D-associated genes across cancer lineages are MEA1, CDC5L, and POLR1C. Each is linked with PPP2R5D in more than 6 cancer types. Because this analysis shows association rather than direction, both PPP2R5D-to-partner and partner-to-PPP2R5D results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PPP2R5D versus MEA1 in OV, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPP2R5D→partner) and Y-score (partner→PPP2R5D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVMEA1 →+0.621+0.589.005.00437
LSCCCDC5L →+0.635+0.300<.001<.00137
LSCCPOLR1C →+0.664+0.241<.001<.00136
LSCCTJAP1 →+0.497+0.219<.001<.00136
GBMCSF3R →-0.884-0.180<.001.00235
LSCCKLHDC3 →+0.628+0.282<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,043 associations by consensus.

PPP2R5D vs MEA1 — OV

Per-sample scatter of PPP2R5D vs MEA1 in OV (Pearson r = 0.35).

Explore this scatter interactively →

Exploration