PPP1R2P1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPP1R2P1 mutation is significantly associated with the RNA expression of many other genes, with 77 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PPP1R2P1-associated genes across cancer lineages are SMIM28, RN7SL592P, and MIR3612. Each is linked with PPP1R2P1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PPP1R2P1-to-partner and partner-to-PPP1R2P1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SMIM28 grouped by PPP1R2P1-low versus PPP1R2P1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPP1R2P1→partner) and Y-score (partner→PPP1R2P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSMIM28 →+0.806+2.955<.001.00731
UCECRN7SL592P →+0.218+2.860.002.00431
UCECMIR3612 →+0.346+3.186.003.00831
UCECRN7SL118P →+0.396+2.834.004.00931
UCECATP5MGP6 →+0.406+3.097<.001.00431
UCECH3Y2 →+0.589+2.563.002.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 77 associations by consensus.

SMIM28 by PPP1R2P1 expression — UCEC

Box plot of SMIM28 in PPP1R2P1-low vs PPP1R2P1-high samples in UCEC.

Explore this box plot interactively →

Exploration