PPM1N

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPM1N RNA expression is significantly associated with the RNA expression of many other genes, with 15,602 significant associations in total. UVM shows the largest number of these associations.

The most reproducible PPM1N-associated genes across cancer lineages are RTN2, GIPR, and FCHO1. Each is linked with PPM1N in more than 27 cancer types. Because this analysis shows association rather than direction, both PPM1N-to-partner and partner-to-PPM1N results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPM1N→partner) and Y-score (partner→PPM1N) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ACCRTN2 →+1.374+0.912<.001<.001328
CHOLGIPR →+1.421+1.097.003.005225
UCECFCHO1 →+1.201+0.763<.001<.001324
PAADVASP →+0.731+0.811<.001<.001323
KIRPIRF3 →+0.665+0.393<.001<.001322
ACCRRAS →+1.103+0.934<.001<.001322
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,602 associations by consensus.

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