PPM1K

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PPM1K mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PPM1K-associated genes across cancer lineages are OOSP2, OR9Q2, and TRIM43B. Each is linked with PPM1K in more than 1 cancer types. Because this analysis shows association rather than direction, both PPM1K-to-partner and partner-to-PPM1K results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OOSP2 grouped by PPM1K-low versus PPM1K-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPM1K→partner) and Y-score (partner→PPM1K) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEOOSP2 →+0.016+4.977<.001.00731
LARGE_INTESTINEOR9Q2 →+0.062+4.977<.001.00731
BLOOD_LeukemiaTRIM43B →+0.027+3.234<.001.00831
BLOOD_LeukemiaTPRX1 →+0.008+3.475.001.00631
BLOOD_LeukemiaTAS2R39 →+0.039+3.339.005.00631
BLOOD_LeukemiaTLE7 →+0.023+3.969<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

OOSP2 by PPM1K expression — LARGE_INTESTINE

Box plot of OOSP2 in PPM1K-low vs PPM1K-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration