PPL

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPL RNA expression is significantly associated with the protein abundance of many other proteins, with 13,354 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PPL-associated proteins across cancer lineages are PPL_S1657, PPL_S887, and PPL_S14. Each is linked with PPL in more than 8 cancer types. Because this analysis shows association rather than direction, both PPL-to-partner and partner-to-PPL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PPL versus PPL_S1657 in GBM, with a Pearson correlation of 0.66.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PPL→partner) and Y-score (partner→PPL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPPL_S1657 →+0.847+1.189.003.00939
GBMPPL_S887 →+1.199+2.028.009.00129
GBMPPL_S14 →+1.551+1.154<.001<.00137
HNSCEVPL →+0.755+1.051<.001<.00137
BRCAEVPL_S2025 →+0.908+0.834.003.00637
LSCCPPL_S830 →+1.122+1.163<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,354 associations by consensus.

PPL vs PPL_S1657 — GBM

Per-sample scatter of PPL vs PPL_S1657 in GBM (Pearson r = 0.66).

Explore this scatter interactively →

Exploration