PPHLN1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPHLN1 mutation is significantly associated with the total protein of many other genes, with 36 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PPHLN1-associated genes across cancer lineages are ATM, Caspase-7-cleavedD198, and Caspase-8. Each is linked with PPHLN1 in more than 2 cancer types. Because this analysis shows association rather than direction, both PPHLN1-to-partner and partner-to-PPHLN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by PPHLN1-low versus PPHLN1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPHLN1→partner) and Y-score (partner→PPHLN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.476-1.415.005.04633
UCECCaspase-7-cleavedD198 →+0.606+2.135.006.01032
UCECCaspase-8 →-0.267-3.558.004.00232
UCECERK2 →+0.167+2.321.020.03331
UCECFASN →+0.398+1.415.007.04631
UCECGAPDH →+0.451+1.874.025.04931
Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

ATM by PPHLN1 expression — UCEC

Box plot of ATM in PPHLN1-low vs PPHLN1-high samples in UCEC.

Explore this box plot interactively →

Exploration