POU2AF1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, POU2AF1 mutation is significantly associated with the RNA expression of many other genes, with 799 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible POU2AF1-associated genes across cancer lineages are RN7SL229P, IGHD3-9, and LINC01134. Each is linked with POU2AF1 in more than 1 cancer types. Because this analysis shows association rather than direction, both POU2AF1-to-partner and partner-to-POU2AF1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL229P grouped by POU2AF1-low versus POU2AF1-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (POU2AF1→partner) and Y-score (partner→POU2AF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRN7SL229P →+0.069+3.990<.001.00932
UCECIGHD3-9 →+1.681+2.857<.001<.00132
UCECLINC01134 →+0.353+3.212.003.00932
UCECRN7SL794P →+0.432+2.459<.001.00132
UCECRN7SL447P →+0.240+2.570<.001.00432
SKCMRNA5SP285 →+0.143+5.003<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 799 associations by consensus.

RN7SL229P by POU2AF1 expression — SKCM

Box plot of RN7SL229P in POU2AF1-low vs POU2AF1-high samples in SKCM.

Explore this box plot interactively →

Exploration