POTEC

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, POTEC mutation is significantly associated with the total protein of many other genes, with 44 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible POTEC-associated genes across cancer lineages are 4E-BP1, CDK1, and FoxM1. Each is linked with POTEC in more than 2 cancer types. Because this analysis shows association rather than direction, both POTEC-to-partner and partner-to-POTEC results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (POTEC→partner) and Y-score (partner→POTEC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC4E-BP1 →+0.222+1.351.012.04233
SKCMCDK1 →+0.183+3.000.012.03533
LUADFoxM1 →+0.251+2.334.028.01823
LUADMSH6 →+0.463+3.338<.001.00432
LUAD53BP1 →+0.284+2.824.029.03432
UCECKu80 →+0.159+1.405.040.01232
Each partner links to its Q-omics profile. Showing the 6 strongest of 44 associations by consensus.

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