POP5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, POP5 protein abundance is significantly associated with the RNA expression of many other genes, with 3,416 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible POP5-associated genes across cancer lineages are PLN, C1QTNF9, and TMEM198. Each is linked with POP5 in more than 2 cancer types. Because this analysis shows association rather than direction, both POP5-to-partner and partner-to-POP5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, POP5 versus PLN in COAD, with a Pearson correlation of -0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (POP5→partner) and Y-score (partner→POP5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPLN →-2.000-0.442.003<.00133
BRCAC1QTNF9 →-0.231-0.305.002.00233
BRCATMEM198 →+0.761+0.377.001.00223
OVSMC2-AS1 →+0.169+0.222.005.00332
CCRCCSLC16A6 →+1.156+0.339<.001.00132
COADIGLL1 →-0.213-0.403.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,416 associations by consensus.

POP5 vs PLN — COAD

Per-sample scatter of POP5 vs PLN in COAD (Pearson r = -0.54).

Explore this scatter interactively →

Exploration