POMGNT1

Across TCGA cell cohorts, POMGNT1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,700 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible POMGNT1-associated GO terms across cancer lineages are Ceramide metabolic process, Collagen biosynthetic process, and Glycoprotein catabolic process. Each is linked with POMGNT1 in more than 10 cancer types. Because this analysis shows association rather than direction, both POMGNT1-to-partner and partner-to-POMGNT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ceramide metabolic process grouped by POMGNT1-low versus POMGNT1-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (POMGNT1→partner) and Y-score (partner→POMGNT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	Ceramide metabolic process →	+0.071	+0.610	<.001	.003	3	11
CNS	Collagen biosynthetic process →	+0.222	+0.522	.001	.009	3	10
CNS	Glycoprotein catabolic process →	+0.178	+0.772	<.001	<.001	3	10
BLOOD_Myeloma	Protein localization to vacuole →	+0.075	+0.894	.001	.004	3	10
SKIN	Retrograde transport, endosome to Golgi →	+0.063	+0.672	.001	<.001	3	10
CNS	Carbohydrate derivative catabolic process →	+0.077	+0.699	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,700 associations by consensus.

Ceramide metabolic process by POMGNT1 expression — OESOPHAGUS

Explore this box plot interactively →