POLR1F

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, POLR1F mass-spec protein differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of POLR1F’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LSCC), where POLR1F mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types POLR1F is over-expressed in tumor.

LSCC, LUAD, and HNSC are the cancer types where POLR1F tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in POLR1F mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LSCCMaleII,III,IV+0.697<.0018view →
LUADMaleIII,IV+0.697<.0018view →
HNSCMaleIII,IV+0.286<.0018view →
COADMaleAll+0.427<.0016view →
PDACMaleAll+0.294.0024view →
CCRCCMaleAll+0.161<.0014view →
OVAllAll+0.723.0152view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

POLR1F–LSCC

Tumor-vs-normal mass-spec protein box plot for POLR1F in LSCC.

Open the LSCC breakdown →

Exploration