POLR1C

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, POLR1C mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible POLR1C-associated genes across cancer lineages are Stathmin, ATM, and E-Cadherin. Each is linked with POLR1C in more than 1 cancer types. Because this analysis shows association rather than direction, both POLR1C-to-partner and partner-to-POLR1C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Stathmin grouped by POLR1C-low versus POLR1C-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (POLR1C→partner) and Y-score (partner→POLR1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECStathmin →+0.169+2.321.008.03432
UCECATM →-0.728-3.156<.001.01832
UCECE-Cadherin →-0.573-2.990.011.03632
UCECEGFR_pY1068 →-0.304-2.584.009.01122
UCECMyosin-IIa_pS1943 →+0.244+1.887.011.03131
UCECMyosin-IIa →+0.222+3.010.013.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

Stathmin by POLR1C expression — UCEC

Box plot of Stathmin in POLR1C-low vs POLR1C-high samples in UCEC.

Explore this box plot interactively →

Exploration