POLK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, POLK protein abundance is significantly associated with the RNA expression of many other genes, with 4,002 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible POLK-associated genes across cancer lineages are FAM184A, AP3B1, and AGGF1. Each is linked with POLK in more than 2 cancer types. Because this analysis shows association rather than direction, both POLK-to-partner and partner-to-POLK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, POLK versus FAM184A in HNSC, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (POLK→partner) and Y-score (partner→POLK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCFAM184A →+0.845+0.357.003.00833
CCRCCAP3B1 →+0.241+0.222.001.00433
BRCAAGGF1 →+0.253+0.207.006<.00133
BRCACFAP91 →+0.543+0.218.001<.00133
PDACGLCCI1 →-0.682-0.390<.001<.00132
UCECTNFRSF21 →-0.770-0.255<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,002 associations by consensus.

POLK vs FAM184A — HNSC

Per-sample scatter of POLK vs FAM184A in HNSC (Pearson r = 0.42).

Explore this scatter interactively →

Exploration