POLB

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, POLB protein abundance is significantly associated with the RNA expression of many other genes, with 11,811 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible POLB-associated genes across cancer lineages are RNF170, KAT6A, and NSD3. Each is linked with POLB in more than 7 cancer types. Because this analysis shows association rather than direction, both POLB-to-partner and partner-to-POLB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, POLB versus RNF170 in HNSC, with a Pearson correlation of 0.31.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (POLB→partner) and Y-score (partner→POLB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRNF170 →+0.643+0.390.001<.00138
HNSCKAT6A →+0.600+0.397<.001<.00138
LSCCNSD3 →+0.976+0.522<.001<.00137
HNSCFNTA →+0.507+0.339<.001<.00137
HNSCSMIM19 →+0.672+0.327<.001<.00137
BRCAGPAT4 →+0.749+0.436<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,811 associations by consensus.

POLB vs RNF170 — HNSC

Per-sample scatter of POLB vs RNF170 in HNSC (Pearson r = 0.31).

Explore this scatter interactively →

Exploration