PMS2P9

Across TCGA patient cohorts, PMS2P9 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,646 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible PMS2P9-associated GO terms across cancer lineages are Co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway, Positive regulation of cytoplasmic mRNA processing body assembly, and Co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway. Each is linked with PMS2P9 in more than 18 cancer types. Because this analysis shows association rather than direction, both PMS2P9-to-partner and partner-to-PMS2P9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway grouped by PMS2P9-low versus PMS2P9-high in READ.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PMS2P9→partner) and Y-score (partner→PMS2P9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
READ	Co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway →	+0.046	+0.179	<.001	<.001	3	19
ESCA	Positive regulation of cytoplasmic mRNA processing body assembly →	+0.058	+0.261	<.001	<.001	3	19
READ	Co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway →	+0.044	+0.158	<.001	<.001	3	18
UVM	Telomere organization →	+0.024	+0.063	<.001	.003	3	18
UVM	Regulation of mRNA export from nucleus →	+0.053	+0.074	<.001	<.001	3	18
ESCA	Negative regulation of stem cell differentiation →	+0.078	+0.288	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,646 associations by consensus.

Co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway by PMS2P9 expression — READ

Explore this box plot interactively →