PMFBP1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PMFBP1 mutation is significantly associated with the total protein of many other genes, with 52 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PMFBP1-associated genes across cancer lineages are PCNA, c-Jun_pS73, and GAPDH. Each is linked with PMFBP1 in more than 2 cancer types. Because this analysis shows association rather than direction, both PMFBP1-to-partner and partner-to-PMFBP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCNA grouped by PMFBP1-low versus PMFBP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PMFBP1→partner) and Y-score (partner→PMFBP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPCNA →+0.273+2.459<.001<.00133
SKCMc-Jun_pS73 →-0.130-1.760.003.00233
SKCMGAPDH →+0.633+1.777<.001.00233
UCECINPP4B →-0.221-2.222.048.00932
UCECJNK_pT183_Y185 →-0.206-2.807<.001.00232
UCECMEK1 →+0.443+3.087<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 52 associations by consensus.

PCNA by PMFBP1 expression — UCEC

Box plot of PCNA in PMFBP1-low vs PMFBP1-high samples in UCEC.

Explore this box plot interactively →

Exploration