PMF1

Across TCGA patient cohorts, PMF1 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,946 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PMF1-associated proteins across cancer lineages are GATAD2B, CDC73, and CHAMP1. Each is linked with PMF1 in more than 8 cancer types. Because this analysis shows association rather than direction, both PMF1-to-partner and partner-to-PMF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PMF1 versus GATAD2B in GBM, with a Pearson correlation of 0.63.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PMF1→partner) and Y-score (partner→PMF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	GATAD2B →	+0.342	+0.392	<.001	<.001	3	9
COAD	CDC73 →	+0.384	+0.595	<.001	<.001	3	8
GBM	CHAMP1 →	+0.395	+0.373	<.001	<.001	3	8
HNSC	PARP1 →	+0.591	+0.755	<.001	<.001	3	8
LSCC	POGZ →	+0.304	+0.447	<.001	<.001	3	7
HNSC	RPRD2 →	+0.348	+0.579	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,946 associations by consensus.

PMF1 vs GATAD2B — GBM

Explore this scatter interactively →