PLEKHA4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PLEKHA4 protein abundance is significantly associated with the RNA expression of many other genes, with 6,799 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PLEKHA4-associated genes across cancer lineages are LIF, C1S, and SULF2. Each is linked with PLEKHA4 in more than 4 cancer types. Because this analysis shows association rather than direction, both PLEKHA4-to-partner and partner-to-PLEKHA4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PLEKHA4 versus LIF in UCEC, with a Pearson correlation of 0.31.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLEKHA4→partner) and Y-score (partner→PLEKHA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECLIF →+1.514+0.341<.001.00835
GBMC1S →+0.795+0.271<.001<.00134
BRCASULF2 →+1.301+0.674<.001<.00134
UCECVDR →+0.767+0.513.002<.00134
UCECHRH1 →+0.910+0.448<.001<.00134
LSCCMEDAG →+0.816+0.396.003.00124
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,799 associations by consensus.

PLEKHA4 vs LIF — UCEC

Per-sample scatter of PLEKHA4 vs LIF in UCEC (Pearson r = 0.31).

Explore this scatter interactively →

Exploration