PLA2G4D

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PLA2G4D protein abundance is significantly associated with the RNA expression of many other genes, with 1,658 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible PLA2G4D-associated genes across cancer lineages are TREX2, RNF225, and LGALS1. Each is linked with PLA2G4D in more than 1 cancer types. Because this analysis shows association rather than direction, both PLA2G4D-to-partner and partner-to-PLA2G4D results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PLA2G4D versus TREX2 in HNSC, with a Pearson correlation of 0.62.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLA2G4D→partner) and Y-score (partner→PLA2G4D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTREX2 →+1.573+1.155<.001<.00132
UCECRNF225 →+1.365+0.714<.001.00132
UCECLGALS1 →+2.449+0.770.003<.00131
UCECPOLR2F →+1.197+0.839.003<.00131
UCECTSPO →+4.395+0.790.005<.00131
UCECTAB1 →+0.715+0.710.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,658 associations by consensus.

PLA2G4D vs TREX2 — HNSC

Per-sample scatter of PLA2G4D vs TREX2 in HNSC (Pearson r = 0.62).

Explore this scatter interactively →

Exploration