PITHD1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PITHD1 protein abundance is significantly associated with the RNA expression of many other genes, with 14,536 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PITHD1-associated genes across cancer lineages are PPP1R12B, MPDZ, and PLCL1. Each is linked with PITHD1 in more than 4 cancer types. Because this analysis shows association rather than direction, both PITHD1-to-partner and partner-to-PITHD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PITHD1 versus PPP1R12B in OV, with a Pearson correlation of 0.53.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PITHD1→partner) and Y-score (partner→PITHD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPPP1R12B →+1.311+0.497<.001<.00135
OVMPDZ →+1.221+0.436<.001<.00134
GBMPLCL1 →+1.108+0.341<.001<.00134
BRCACNTN4 →+0.759+0.292<.001.00734
BRCACACNA2D1 →+1.130+0.457<.001<.00134
GBMNEGR1 →+1.205+0.421<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,536 associations by consensus.

PITHD1 vs PPP1R12B — OV

Per-sample scatter of PITHD1 vs PPP1R12B in OV (Pearson r = 0.53).

Explore this scatter interactively →

Exploration