PIGC

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PIGC mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PIGC-associated genes across cancer lineages are JNK_pT183_Y185, MEK1, and Caspase-7-cleavedD198. Each is linked with PIGC in more than 1 cancer types. Because this analysis shows association rather than direction, both PIGC-to-partner and partner-to-PIGC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, JNK_pT183_Y185 grouped by PIGC-low versus PIGC-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIGC→partner) and Y-score (partner→PIGC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECJNK_pT183_Y185 →-0.196-2.459.012.01931
UCECMEK1 →+0.453+3.321.007.01031
UCECCaspase-7-cleavedD198 →+0.776+2.189.004.03431
UCECeIF4E →+0.229+3.000.019.03621
UCECShc_pY317 →-0.185-3.321.009.01021
UCECERK2 →+0.284+3.700.001.00111
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

JNK_pT183_Y185 by PIGC expression — UCEC

Box plot of JNK_pT183_Y185 in PIGC-low vs PIGC-high samples in UCEC.

Explore this box plot interactively →

Exploration