PIFO

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PIFO mutation is significantly associated with the total protein of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PIFO-associated genes across cancer lineages are Caspase-7-cleavedD198, Caspase-8, and p62 Lck ligand. Each is linked with PIFO in more than 1 cancer types. Because this analysis shows association rather than direction, both PIFO-to-partner and partner-to-PIFO results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by PIFO-low versus PIFO-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PIFO→partner) and Y-score (partner→PIFO) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.867+2.827.005.03531
UCECCaspase-8 →-0.342-3.321.009.01031
UCECp62 Lck ligand →+0.457+3.009.007.01921
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Caspase-7-cleavedD198 by PIFO expression — UCEC

Box plot of Caspase-7-cleavedD198 in PIFO-low vs PIFO-high samples in UCEC.

Explore this box plot interactively →

Exploration