PHOSPHO1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PHOSPHO1 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,446 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PHOSPHO1-associated proteins across cancer lineages are VAV1, WAS, and ARHGAP25. Each is linked with PHOSPHO1 in more than 7 cancer types. Because this analysis shows association rather than direction, both PHOSPHO1-to-partner and partner-to-PHOSPHO1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PHOSPHO1 versus VAV1 in GBM, with a Pearson correlation of 0.68.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PHOSPHO1→partner) and Y-score (partner→PHOSPHO1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMVAV1 →+0.634+0.928<.001<.00138
GBMWAS →+0.530+0.878<.001<.00138
HNSCARHGAP25 →+0.558+0.684<.001<.00138
GBMARHGAP45 →+0.545+0.654<.001<.00138
HNSCARHGAP9 →+0.497+0.798<.001<.00138
LSCCARHGAP9_S475 →+1.059+0.818<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,446 associations by consensus.

PHOSPHO1 vs VAV1 — GBM

Per-sample scatter of PHOSPHO1 vs VAV1 in GBM (Pearson r = 0.68).

Explore this scatter interactively →

Exploration