PHF21B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PHF21B protein abundance is significantly associated with the RNA expression of many other genes, with 269 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible PHF21B-associated genes across cancer lineages are MYRF, ZNF331, and H3-3B. Each is linked with PHF21B in more than 1 cancer types. Because this analysis shows association rather than direction, both PHF21B-to-partner and partner-to-PHF21B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PHF21B versus MYRF in BRCA, with a Pearson correlation of -0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PHF21B→partner) and Y-score (partner→PHF21B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMYRF →-1.025-2.100<.001.00331
BRCAZNF331 →+0.695+2.157.001.00931
BRCAH3-3B →+0.660+2.256.001.00531
BRCASPINK7 →+0.255+2.324.004.00731
BRCAACOX1 →+0.867+2.157.003.00931
BRCAPPIP5K1 →+1.127+1.547.003.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 269 associations by consensus.

PHF21B vs MYRF — BRCA

Per-sample scatter of PHF21B vs MYRF in BRCA (Pearson r = -0.56).

Explore this scatter interactively →

Exploration