PHAX

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PHAX mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PHAX-associated genes across cancer lineages are DMRTC2, GUCA2A, and OR11H2. Each is linked with PHAX in more than 1 cancer types. Because this analysis shows association rather than direction, both PHAX-to-partner and partner-to-PHAX results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DMRTC2 grouped by PHAX-low versus PHAX-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PHAX→partner) and Y-score (partner→PHAX) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaDMRTC2 →+0.009+4.643<.001.00531
BLOOD_LeukemiaGUCA2A →+0.052+5.969<.001.00131
BLOOD_LeukemiaOR11H2 →+0.060+5.201<.001.00631
BLOOD_LeukemiaKRTAP7-1 →+0.095+5.539<.001.00331
LARGE_INTESTINEHSFY2 →+0.023+4.977<.001.00731
OVARYDAZ2 →+0.106+5.807<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

DMRTC2 by PHAX expression — BLOOD_Lymphoma

Box plot of DMRTC2 in PHAX-low vs PHAX-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration