PGM2L1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PGM2L1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,827 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PGM2L1-associated GO terms across cancer lineages are Golgi vesicle transport, Maintenance of location in cell, and Nuclear membrane organization. Each is linked with PGM2L1 in more than 11 cancer types. Because this analysis shows association rather than direction, both PGM2L1-to-partner and partner-to-PGM2L1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi vesicle transport grouped by PGM2L1-low versus PGM2L1-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PGM2L1→partner) and Y-score (partner→PGM2L1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCGolgi vesicle transport →+0.077+1.496<.001<.001312
OVARYMaintenance of location in cell →+0.095+1.199<.001.005312
LIVERNuclear membrane organization →+0.091+1.064.007.003312
BREASTNuclear envelope organization →+0.076+1.061.001.002312
OVARYRegulation of syncytium formation by plasma membrane fusion →+0.110+1.621<.001<.001311
OVARYVesicle budding from membrane →+0.067+1.166<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,827 associations by consensus.

Golgi vesicle transport by PGM2L1 expression — LUNG_SCLC

Box plot of Golgi vesicle transport in PGM2L1-low vs PGM2L1-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration